Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav5d-4Q5R1F6 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Gm43433-201ENSMUST00000196573 481 ntBASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Gm45930-201ENSMUST00000221330 292 ntBASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav5d-4Q5R1F6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Gm5370-201ENSMUST00000187187 574 ntBASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Gm24136-201ENSMUST00000083374 165 ntBASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav5d-4Q5R1F6 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms