Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Syt7-204ENSMUST00000223586 1344 ntBASIC12.52□□□□□ -0.41
Cnga4Q3UW12 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cnga4Q3UW12 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Mir7654-201ENSMUST00000185082 70 ntBASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Gm44882-201ENSMUST00000205702 802 ntBASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnga4Q3UW12 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Gm13123-201ENSMUST00000122173 492 ntBASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnga4Q3UW12 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Gm8805-201ENSMUST00000117848 313 ntBASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cnga4Q3UW12 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms