Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.54□□□□□ -0.08
Limch1Q3UH68 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.54□□□□□ -0.08
Limch1Q3UH68 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Limch1Q3UH68 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.53□□□□□ -0.08
Limch1Q3UH68 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Gm11597-201ENSMUST00000121423 964 ntBASIC14.53□□□□□ -0.08
Limch1Q3UH68 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Gm8018-201ENSMUST00000173536 789 ntBASIC14.53□□□□□ -0.08
Limch1Q3UH68 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Gm27390-201ENSMUST00000184516 176 ntBASIC14.53□□□□□ -0.08
Limch1Q3UH68 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.53□□□□□ -0.08
Limch1Q3UH68 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Limch1Q3UH68 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Limch1Q3UH68 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC14.52□□□□□ -0.08
Limch1Q3UH68 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Limch1Q3UH68 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Limch1Q3UH68 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Limch1Q3UH68 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Limch1Q3UH68 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Limch1Q3UH68 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Limch1Q3UH68 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Limch1Q3UH68 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Limch1Q3UH68 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Limch1Q3UH68 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Limch1Q3UH68 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Limch1Q3UH68 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Limch1Q3UH68 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.52□□□□□ -0.09
Limch1Q3UH68 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Limch1Q3UH68 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Limch1Q3UH68 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Limch1Q3UH68 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.52□□□□□ -0.09
Limch1Q3UH68 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.52□□□□□ -0.09
Limch1Q3UH68 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.52□□□□□ -0.09
Limch1Q3UH68 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.52□□□□□ -0.09
Limch1Q3UH68 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms