Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rufy4Q3TYX8 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Gm32999-201ENSMUST00000192693 562 ntBASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Gm19187-201ENSMUST00000206781 892 ntBASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Gm5363-201ENSMUST00000211927 938 ntBASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rufy4Q3TYX8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Gm23200-201ENSMUST00000104379 132 ntBASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Gm14277-201ENSMUST00000121195 360 ntBASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Gm8385-201ENSMUST00000058999 643 ntBASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rufy4Q3TYX8 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rufy4Q3TYX8 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rufy4Q3TYX8 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Rufy4Q3TYX8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rufy4Q3TYX8 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rufy4Q3TYX8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.58□□□□□ -0.24
Rufy4Q3TYX8 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rufy4Q3TYX8 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rufy4Q3TYX8 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Rufy4Q3TYX8 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rufy4Q3TYX8 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rufy4Q3TYX8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms