Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Gm6771-201ENSMUST00000182716 1001 ntBASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Gm9645-201ENSMUST00000197131 792 ntBASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Gm13384-201ENSMUST00000117166 1344 ntBASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.62□□□□□ -0.07
Chrna5Q2MKA5 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Gm25880-201ENSMUST00000104331 132 ntBASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Chrna5Q2MKA5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Gm12628-201ENSMUST00000122193 382 ntBASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Chrna5Q2MKA5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.59□□□□□ -0.07
Chrna5Q2MKA5 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna5Q2MKA5 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna5Q2MKA5 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.59□□□□□ -0.07
Chrna5Q2MKA5 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Chrna5Q2MKA5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chrna5Q2MKA5 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Chrna5Q2MKA5 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC14.59□□□□□ -0.07
Chrna5Q2MKA5 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC14.59□□□□□ -0.07
Chrna5Q2MKA5 Gm18367-201ENSMUST00000176139 600 ntBASIC14.59□□□□□ -0.07
Chrna5Q2MKA5 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms