Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm10288-201ENSMUST00000084614 537 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.38□□□□□ -0.43
Col9a1Q05722 Arl14ep-202ENSMUST00000093883 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col9a1Q05722 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC12.38□□□□□ -0.43
Col9a1Q05722 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col9a1Q05722 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.38□□□□□ -0.43
Col9a1Q05722 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Gm44742-201ENSMUST00000207190 1412 ntBASIC12.37□□□□□ -0.43
Col9a1Q05722 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col9a1Q05722 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Col9a1Q05722 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col9a1Q05722 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.37□□□□□ -0.43
Col9a1Q05722 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col9a1Q05722 Gm14999-201ENSMUST00000121039 624 ntBASIC12.37□□□□□ -0.43
Col9a1Q05722 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col9a1Q05722 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.37□□□□□ -0.43
Col9a1Q05722 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Gm17070-201ENSMUST00000170463 784 ntBASIC12.37□□□□□ -0.43
Col9a1Q05722 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Asb4-202ENSMUST00000183358 1143 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Gm37560-201ENSMUST00000194289 1000 ntBASIC12.37□□□□□ -0.43
Col9a1Q05722 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.37□□□□□ -0.43
Col9a1Q05722 Gm45733-201ENSMUST00000212988 437 ntBASIC12.37□□□□□ -0.43
Col9a1Q05722 Gm19572-201ENSMUST00000214326 338 ntBASIC12.37□□□□□ -0.43
Col9a1Q05722 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.37□□□□□ -0.43
Col9a1Q05722 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col9a1Q05722 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Col9a1Q05722 Mir326-201ENSMUST00000083637 95 ntBASIC12.37□□□□□ -0.43
Col9a1Q05722 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col9a1Q05722 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.37□□□□□ -0.43
Col9a1Q05722 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.37□□□□□ -0.43
Col9a1Q05722 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Col9a1Q05722 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col9a1Q05722 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.37□□□□□ -0.43
Col9a1Q05722 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm12684-201ENSMUST00000118675 999 ntBASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm8199-201ENSMUST00000121323 823 ntBASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm16459-201ENSMUST00000121443 686 ntBASIC12.36□□□□□ -0.43
Col9a1Q05722 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.36□□□□□ -0.43
Col9a1Q05722 Mir6953-201ENSMUST00000184745 68 ntBASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm28882-201ENSMUST00000185504 314 ntBASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm28962-201ENSMUST00000187993 621 ntTSL 5 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm28692-202ENSMUST00000189645 621 ntTSL 5 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm43186-201ENSMUST00000198130 824 ntBASIC12.36□□□□□ -0.43
Col9a1Q05722 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.36□□□□□ -0.43
Col9a1Q05722 Lrp1b-212ENSMUST00000204204 798 ntTSL 2 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Col9a1Q05722 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms