Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.29□□□□□ -0.6
Scn1bP97952 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.29□□□□□ -0.6
Scn1bP97952 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.29□□□□□ -0.6
Scn1bP97952 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Scn1bP97952 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.29□□□□□ -0.6
Scn1bP97952 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Scn1bP97952 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.29□□□□□ -0.6
Scn1bP97952 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.29□□□□□ -0.6
Scn1bP97952 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.29□□□□□ -0.6
Scn1bP97952 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scn1bP97952 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.28□□□□□ -0.6
Scn1bP97952 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Scn1bP97952 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.28□□□□□ -0.6
Scn1bP97952 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Scn1bP97952 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Scn1bP97952 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Scn1bP97952 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Scn1bP97952 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Scn1bP97952 Mir7684-201ENSMUST00000183858 60 ntBASIC11.28□□□□□ -0.6
Scn1bP97952 Gm43094-201ENSMUST00000196549 921 ntBASIC11.28□□□□□ -0.6
Scn1bP97952 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.28□□□□□ -0.6
Scn1bP97952 Gm5161-201ENSMUST00000075243 853 ntBASIC11.28□□□□□ -0.6
Scn1bP97952 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.28□□□□□ -0.6
Scn1bP97952 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Scn1bP97952 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.28□□□□□ -0.6
Scn1bP97952 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.28□□□□□ -0.6
Scn1bP97952 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Scn1bP97952 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scn1bP97952 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scn1bP97952 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Scn1bP97952 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scn1bP97952 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Scn1bP97952 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scn1bP97952 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.27□□□□□ -0.6
Scn1bP97952 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scn1bP97952 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.27□□□□□ -0.6
Scn1bP97952 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scn1bP97952 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scn1bP97952 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Scn1bP97952 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scn1bP97952 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Scn1bP97952 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scn1bP97952 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.27□□□□□ -0.61
Scn1bP97952 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scn1bP97952 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.27□□□□□ -0.61
Scn1bP97952 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scn1bP97952 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.27□□□□□ -0.61
Scn1bP97952 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.27□□□□□ -0.61
Scn1bP97952 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scn1bP97952 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Scn1bP97952 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Scn1bP97952 Gm28760-201ENSMUST00000185995 736 ntBASIC11.27□□□□□ -0.61
Scn1bP97952 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Scn1bP97952 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scn1bP97952 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scn1bP97952 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scn1bP97952 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Scn1bP97952 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scn1bP97952 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Scn1bP97952 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Scn1bP97952 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.27□□□□□ -0.61
Scn1bP97952 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Scn1bP97952 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Scn1bP97952 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms