Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-3P97334 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC15.45■□□□□ 0.06
Nkx2-3P97334 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Nkx2-3P97334 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Gm43807-201ENSMUST00000200678 1781 ntBASIC15.44■□□□□ 0.06
Nkx2-3P97334 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 AC126257.1-201ENSMUST00000213195 1536 ntBASIC15.44■□□□□ 0.06
Nkx2-3P97334 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Nkx2-3P97334 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 AC098716.1-201ENSMUST00000213527 703 ntBASIC15.44■□□□□ 0.06
Nkx2-3P97334 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Gm26616-202ENSMUST00000195676 3107 ntBASIC15.44■□□□□ 0.06
Nkx2-3P97334 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Nkx2-3P97334 Gm44758-201ENSMUST00000206096 2068 ntBASIC15.44■□□□□ 0.06
Nkx2-3P97334 Gm7537-201ENSMUST00000221660 1414 ntBASIC15.43■□□□□ 0.06
Nkx2-3P97334 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Gm23912-201ENSMUST00000104687 87 ntBASIC15.43■□□□□ 0.06
Nkx2-3P97334 Gm11663-201ENSMUST00000117888 290 ntBASIC15.43■□□□□ 0.06
Nkx2-3P97334 Gm8731-201ENSMUST00000118088 412 ntBASIC15.43■□□□□ 0.06
Nkx2-3P97334 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.43■□□□□ 0.06
Nkx2-3P97334 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC15.43■□□□□ 0.06
Nkx2-3P97334 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Gm6905-201ENSMUST00000205729 511 ntBASIC15.43■□□□□ 0.06
Nkx2-3P97334 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Nkx2-3P97334 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Gm6189-201ENSMUST00000164487 2082 ntBASIC15.42■□□□□ 0.06
Nkx2-3P97334 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Gm11949-201ENSMUST00000117640 372 ntBASIC15.42■□□□□ 0.06
Nkx2-3P97334 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Gm7666-201ENSMUST00000146631 819 ntBASIC15.42■□□□□ 0.06
Nkx2-3P97334 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC15.42■□□□□ 0.06
Nkx2-3P97334 CT009713.8-202ENSMUST00000224732 385 ntBASIC15.42■□□□□ 0.06
Nkx2-3P97334 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Nkx2-3P97334 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms