Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Otx1P80205 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.67□□□□□ -0.7
Otx1P80205 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.67□□□□□ -0.7
Otx1P80205 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Otx1P80205 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.67□□□□□ -0.7
Otx1P80205 Gm13875-201ENSMUST00000120162 282 ntBASIC10.67□□□□□ -0.7
Otx1P80205 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.67□□□□□ -0.7
Otx1P80205 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.67□□□□□ -0.7
Otx1P80205 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 Gm7584-201ENSMUST00000175829 940 ntBASIC10.67□□□□□ -0.7
Otx1P80205 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Otx1P80205 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.67□□□□□ -0.7
Otx1P80205 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.67□□□□□ -0.7
Otx1P80205 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.67□□□□□ -0.7
Otx1P80205 Gm7046-201ENSMUST00000221351 977 ntBASIC10.67□□□□□ -0.7
Otx1P80205 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Otx1P80205 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Otx1P80205 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Otx1P80205 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.67□□□□□ -0.7
Otx1P80205 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Otx1P80205 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.67□□□□□ -0.7
Otx1P80205 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.67□□□□□ -0.7
Otx1P80205 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.67□□□□□ -0.7
Otx1P80205 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Otx1P80205 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Otx1P80205 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
Otx1P80205 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.66□□□□□ -0.7
Otx1P80205 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Otx1P80205 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Otx1P80205 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.66□□□□□ -0.7
Otx1P80205 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Gm13350-201ENSMUST00000120519 479 ntBASIC10.66□□□□□ -0.7
Otx1P80205 Gm14999-201ENSMUST00000121039 624 ntBASIC10.66□□□□□ -0.7
Otx1P80205 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC10.66□□□□□ -0.7
Otx1P80205 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.66□□□□□ -0.7
Otx1P80205 Gm13570-201ENSMUST00000140763 309 ntBASIC10.66□□□□□ -0.7
Otx1P80205 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.66□□□□□ -0.7
Otx1P80205 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Otx1P80205 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.66□□□□□ -0.7
Otx1P80205 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Gm38241-201ENSMUST00000192641 898 ntBASIC10.66□□□□□ -0.7
Otx1P80205 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.66□□□□□ -0.7
Otx1P80205 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.66□□□□□ -0.7
Otx1P80205 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.66□□□□□ -0.7
Otx1P80205 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Otx1P80205 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Otx1P80205 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Otx1P80205 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Otx1P80205 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.66□□□□□ -0.7
Otx1P80205 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Otx1P80205 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Otx1P80205 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Otx1P80205 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Otx1P80205 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Otx1P80205 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Otx1P80205 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Otx1P80205 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Otx1P80205 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.65□□□□□ -0.7
Otx1P80205 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Otx1P80205 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Otx1P80205 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Otx1P80205 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Otx1P80205 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.65□□□□□ -0.7
Otx1P80205 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Otx1P80205 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms