Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.32□□□□□ -0.76
Pdlim4P70271 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Pdlim4P70271 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Pdlim4P70271 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pdlim4P70271 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Pdlim4P70271 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.31□□□□□ -0.76
Pdlim4P70271 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Pdlim4P70271 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.31□□□□□ -0.76
Pdlim4P70271 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pdlim4P70271 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Pdlim4P70271 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.31□□□□□ -0.76
Pdlim4P70271 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.31□□□□□ -0.76
Pdlim4P70271 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pdlim4P70271 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Gm43118-201ENSMUST00000199149 775 ntBASIC10.31□□□□□ -0.76
Pdlim4P70271 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.31□□□□□ -0.76
Pdlim4P70271 Gm18935-201ENSMUST00000212692 664 ntBASIC10.31□□□□□ -0.76
Pdlim4P70271 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.31□□□□□ -0.76
Pdlim4P70271 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Pdlim4P70271 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.31□□□□□ -0.76
Pdlim4P70271 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pdlim4P70271 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pdlim4P70271 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Pdlim4P70271 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Pdlim4P70271 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pdlim4P70271 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.31□□□□□ -0.76
Pdlim4P70271 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Pdlim4P70271 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pdlim4P70271 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Pdlim4P70271 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Pdlim4P70271 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.3□□□□□ -0.76
Pdlim4P70271 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Pdlim4P70271 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.3□□□□□ -0.76
Pdlim4P70271 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Pdlim4P70271 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC10.3□□□□□ -0.76
Pdlim4P70271 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Rmrp-201ENSMUST00000157463 271 ntBASIC10.3□□□□□ -0.76
Pdlim4P70271 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.3□□□□□ -0.76
Pdlim4P70271 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Pdlim4P70271 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms