Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.14□□□□□ -0.47
Lhx1P63006 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Lhx1P63006 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lhx1P63006 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.14□□□□□ -0.47
Lhx1P63006 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Lhx1P63006 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Lhx1P63006 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lhx1P63006 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lhx1P63006 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.14□□□□□ -0.47
Lhx1P63006 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.14□□□□□ -0.47
Lhx1P63006 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Lhx1P63006 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.14□□□□□ -0.47
Lhx1P63006 Gm18711-201ENSMUST00000199341 750 ntBASIC12.14□□□□□ -0.47
Lhx1P63006 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.14□□□□□ -0.47
Lhx1P63006 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.14□□□□□ -0.47
Lhx1P63006 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.14□□□□□ -0.47
Lhx1P63006 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.14□□□□□ -0.47
Lhx1P63006 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lhx1P63006 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.14□□□□□ -0.47
Lhx1P63006 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lhx1P63006 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.14□□□□□ -0.47
Lhx1P63006 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Lhx1P63006 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Lhx1P63006 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.14□□□□□ -0.47
Lhx1P63006 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.14□□□□□ -0.47
Lhx1P63006 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Lhx1P63006 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.14□□□□□ -0.47
Lhx1P63006 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Gm11989-201ENSMUST00000117240 672 ntBASIC12.13□□□□□ -0.47
Lhx1P63006 Gm11362-201ENSMUST00000118838 850 ntBASIC12.13□□□□□ -0.47
Lhx1P63006 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.13□□□□□ -0.47
Lhx1P63006 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Lhx1P63006 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.13□□□□□ -0.47
Lhx1P63006 Gm45186-201ENSMUST00000206874 478 ntBASIC12.13□□□□□ -0.47
Lhx1P63006 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.13□□□□□ -0.47
Lhx1P63006 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.13□□□□□ -0.47
Lhx1P63006 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Lhx1P63006 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lhx1P63006 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Lhx1P63006 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Lhx1P63006 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.12□□□□□ -0.47
Lhx1P63006 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Lhx1P63006 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms