Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Rpl39P62892 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC8.78□□□□□ -1
Rpl39P62892 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Rpl39P62892 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC8.78□□□□□ -1
Rpl39P62892 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC8.78□□□□□ -1
Rpl39P62892 Gm22189-201ENSMUST00000103822 86 ntBASIC8.78□□□□□ -1
Rpl39P62892 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Gm12151-201ENSMUST00000121374 290 ntBASIC8.78□□□□□ -1
Rpl39P62892 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC8.78□□□□□ -1
Rpl39P62892 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Rpl39P62892 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Gm6152-201ENSMUST00000151704 340 ntBASIC8.78□□□□□ -1
Rpl39P62892 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC8.78□□□□□ -1
Rpl39P62892 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC8.78□□□□□ -1
Rpl39P62892 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Gm23363-201ENSMUST00000175024 79 ntBASIC8.78□□□□□ -1
Rpl39P62892 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC8.78□□□□□ -1
Rpl39P62892 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC8.78□□□□□ -1
Rpl39P62892 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Gm43575-201ENSMUST00000196420 516 ntBASIC8.78□□□□□ -1
Rpl39P62892 Gm45195-201ENSMUST00000205597 1008 ntBASIC8.78□□□□□ -1
Rpl39P62892 AC132104.2-201ENSMUST00000215011 266 ntBASIC8.78□□□□□ -1
Rpl39P62892 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 AC139382.1-201ENSMUST00000221402 498 ntBASIC8.78□□□□□ -1
Rpl39P62892 AC132863.2-201ENSMUST00000226643 799 ntBASIC8.78□□□□□ -1
Rpl39P62892 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Rpl39P62892 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Rpl39P62892 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 AC160405.1-201ENSMUST00000218207 1545 ntBASIC8.78□□□□□ -1
Rpl39P62892 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC8.78□□□□□ -1
Rpl39P62892 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Rpl39P62892 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Rpl39P62892 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Rpl39P62892 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl39P62892 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1
Rpl39P62892 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Rpl39P62892 Gm19692-201ENSMUST00000203856 2084 ntBASIC8.77□□□□□ -1
Rpl39P62892 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC8.77□□□□□ -1
Rpl39P62892 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
Rpl39P62892 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Rpl39P62892 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Rpl39P62892 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
Rpl39P62892 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC8.77□□□□□ -1
Rpl39P62892 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
Rpl39P62892 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Rpl39P62892 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
Rpl39P62892 AC127597.1-201ENSMUST00000225697 5711 ntBASIC8.77□□□□□ -1.01
Rpl39P62892 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
Rpl39P62892 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC8.77□□□□□ -1.01
Rpl39P62892 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC8.77□□□□□ -1.01
Rpl39P62892 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Rpl39P62892 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC8.77□□□□□ -1.01
Rpl39P62892 Gm15321-201ENSMUST00000121290 288 ntBASIC8.77□□□□□ -1.01
Rpl39P62892 Gm14719-201ENSMUST00000121891 340 ntBASIC8.77□□□□□ -1.01
Rpl39P62892 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl39P62892 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms