Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Ntng1-201ENSMUST00000051253 327 ntBASIC9.96□□□□□ -0.82
Lmo4P61969 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.96□□□□□ -0.82
Lmo4P61969 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Lmo4P61969 Gm10702-201ENSMUST00000098929 1268 ntBASIC9.96□□□□□ -0.82
Lmo4P61969 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Gm43677-201ENSMUST00000198098 2378 ntBASIC9.96□□□□□ -0.82
Lmo4P61969 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.96□□□□□ -0.82
Lmo4P61969 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Lmo4P61969 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Lmo4P61969 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC9.96□□□□□ -0.82
Lmo4P61969 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Lmo4P61969 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Lmo4P61969 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.96□□□□□ -0.82
Lmo4P61969 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Gm37861-201ENSMUST00000193534 2869 ntBASIC9.96□□□□□ -0.82
Lmo4P61969 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.96□□□□□ -0.82
Lmo4P61969 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Lmo4P61969 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Lmo4P61969 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm44942-201ENSMUST00000096093 2072 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Lmo4P61969 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Lmo4P61969 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Lmo4P61969 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm23251-201ENSMUST00000103773 110 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Lmo4P61969 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.95□□□□□ -0.82
Lmo4P61969 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Gm7851-201ENSMUST00000117574 323 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm12857-201ENSMUST00000117678 592 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm12616-201ENSMUST00000118594 382 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm13408-201ENSMUST00000119822 798 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm12164-201ENSMUST00000121695 551 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm13935-201ENSMUST00000121859 798 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC9.95□□□□□ -0.82
Lmo4P61969 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Gm12624-201ENSMUST00000177615 382 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm12621-201ENSMUST00000177760 382 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm12615-201ENSMUST00000177970 382 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm12622-201ENSMUST00000177975 382 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm12627-201ENSMUST00000178412 382 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm12625-201ENSMUST00000179122 382 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm12614-201ENSMUST00000179586 382 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm12613-201ENSMUST00000180323 382 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC9.95□□□□□ -0.82
Lmo4P61969 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Lmo4P61969 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.95□□□□□ -0.82
Lmo4P61969 AC159819.2-201ENSMUST00000216151 342 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC9.95□□□□□ -0.82
Lmo4P61969 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Lmo4P61969 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Lmo4P61969 Gm45266-201ENSMUST00000210111 2173 ntBASIC9.95□□□□□ -0.82
Lmo4P61969 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Lmo4P61969 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Lmo4P61969 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC9.95□□□□□ -0.82
Lmo4P61969 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Lmo4P61969 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC9.95□□□□□ -0.82
Lmo4P61969 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms