Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm12453-201ENSMUST00000121981 331 ntBASIC12.95□□□□□ -0.34
NcanP55066 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12.95□□□□□ -0.34
NcanP55066 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Gm26957-201ENSMUST00000182645 977 ntBASIC12.95□□□□□ -0.34
NcanP55066 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Gm5700-201ENSMUST00000191483 989 ntBASIC12.95□□□□□ -0.34
NcanP55066 Gm5714-201ENSMUST00000197343 566 ntBASIC12.95□□□□□ -0.34
NcanP55066 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.95□□□□□ -0.34
NcanP55066 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.95□□□□□ -0.34
NcanP55066 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.95□□□□□ -0.34
NcanP55066 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Gm16380-201ENSMUST00000077997 478 ntBASIC12.95□□□□□ -0.34
NcanP55066 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NcanP55066 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NcanP55066 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
NcanP55066 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.95□□□□□ -0.34
NcanP55066 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NcanP55066 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
NcanP55066 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.94□□□□□ -0.34
NcanP55066 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Gm4462-201ENSMUST00000166453 492 ntBASIC12.94□□□□□ -0.34
NcanP55066 Gm4310-201ENSMUST00000177847 889 ntBASIC12.94□□□□□ -0.34
NcanP55066 Gm29808-201ENSMUST00000194419 468 ntBASIC12.94□□□□□ -0.34
NcanP55066 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NcanP55066 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
NcanP55066 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
NcanP55066 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.94□□□□□ -0.34
NcanP55066 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NcanP55066 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
NcanP55066 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
NcanP55066 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NcanP55066 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NcanP55066 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.94□□□□□ -0.34
NcanP55066 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NcanP55066 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NcanP55066 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NcanP55066 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.93□□□□□ -0.34
NcanP55066 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.93□□□□□ -0.34
NcanP55066 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NcanP55066 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
NcanP55066 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
NcanP55066 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC12.93□□□□□ -0.34
NcanP55066 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.93□□□□□ -0.34
NcanP55066 Gm12712-201ENSMUST00000120676 801 ntBASIC12.93□□□□□ -0.34
NcanP55066 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Gm22846-201ENSMUST00000157706 270 ntBASIC12.93□□□□□ -0.34
NcanP55066 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.93□□□□□ -0.34
NcanP55066 Gm20414-201ENSMUST00000172918 646 ntBASIC12.93□□□□□ -0.34
NcanP55066 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC12.93□□□□□ -0.34
NcanP55066 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Gm9135-201ENSMUST00000182963 990 ntBASIC12.93□□□□□ -0.34
NcanP55066 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.93□□□□□ -0.34
NcanP55066 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.93□□□□□ -0.34
NcanP55066 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.93□□□□□ -0.34
NcanP55066 Gm18514-201ENSMUST00000218980 436 ntBASIC12.93□□□□□ -0.34
NcanP55066 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.93□□□□□ -0.34
NcanP55066 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.93□□□□□ -0.34
NcanP55066 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
NcanP55066 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
NcanP55066 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms