Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.17□□□□□ -0.3
NrlP54846 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.17□□□□□ -0.3
NrlP54846 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NrlP54846 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NrlP54846 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NrlP54846 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NrlP54846 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.16□□□□□ -0.3
NrlP54846 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.16□□□□□ -0.3
NrlP54846 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.16□□□□□ -0.3
NrlP54846 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.16□□□□□ -0.3
NrlP54846 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NrlP54846 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NrlP54846 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
NrlP54846 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Gm15711-201ENSMUST00000118889 535 ntBASIC13.16□□□□□ -0.3
NrlP54846 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NrlP54846 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.16□□□□□ -0.3
NrlP54846 Gm7467-201ENSMUST00000185173 652 ntBASIC13.16□□□□□ -0.3
NrlP54846 Gm28071-201ENSMUST00000190355 478 ntBASIC13.16□□□□□ -0.3
NrlP54846 Gm42937-201ENSMUST00000197360 752 ntBASIC13.16□□□□□ -0.3
NrlP54846 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NrlP54846 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.16□□□□□ -0.3
NrlP54846 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.16□□□□□ -0.3
NrlP54846 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.16□□□□□ -0.3
NrlP54846 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.16□□□□□ -0.3
NrlP54846 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NrlP54846 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.16□□□□□ -0.3
NrlP54846 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.16□□□□□ -0.3
NrlP54846 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
NrlP54846 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NrlP54846 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NrlP54846 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.15□□□□□ -0.3
NrlP54846 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
NrlP54846 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NrlP54846 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NrlP54846 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
NrlP54846 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
NrlP54846 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.15□□□□□ -0.3
NrlP54846 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.15□□□□□ -0.3
NrlP54846 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
NrlP54846 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.15□□□□□ -0.3
NrlP54846 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.15□□□□□ -0.3
NrlP54846 Rmrp-201ENSMUST00000157463 271 ntBASIC13.15□□□□□ -0.3
NrlP54846 Gm5616-201ENSMUST00000165252 384 ntBASIC13.15□□□□□ -0.3
NrlP54846 Gm8741-201ENSMUST00000174736 384 ntBASIC13.15□□□□□ -0.3
NrlP54846 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.15□□□□□ -0.3
NrlP54846 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
NrlP54846 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.15□□□□□ -0.3
NrlP54846 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
NrlP54846 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.15□□□□□ -0.3
NrlP54846 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
NrlP54846 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NrlP54846 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
NrlP54846 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms