Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacnb3P54285 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Cacnb3P54285 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacnb3P54285 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacnb3P54285 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.38□□□□□ -0.11
Cacnb3P54285 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cacnb3P54285 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.37□□□□□ -0.11
Cacnb3P54285 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Cacnb3P54285 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Gm17391-201ENSMUST00000171036 126 ntBASIC14.37□□□□□ -0.11
Cacnb3P54285 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Cacnb3P54285 Gm28686-201ENSMUST00000187404 609 ntBASIC14.37□□□□□ -0.11
Cacnb3P54285 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.37□□□□□ -0.11
Cacnb3P54285 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.37□□□□□ -0.11
Cacnb3P54285 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cacnb3P54285 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cacnb3P54285 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
Cacnb3P54285 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Cacnb3P54285 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacnb3P54285 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.37□□□□□ -0.11
Cacnb3P54285 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cacnb3P54285 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.36□□□□□ -0.11
Cacnb3P54285 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cacnb3P54285 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cacnb3P54285 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cacnb3P54285 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cacnb3P54285 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Gm15573-201ENSMUST00000119487 540 ntBASIC14.36□□□□□ -0.11
Cacnb3P54285 Gm8199-201ENSMUST00000121323 823 ntBASIC14.36□□□□□ -0.11
Cacnb3P54285 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC14.36□□□□□ -0.11
Cacnb3P54285 Gm43830-201ENSMUST00000198760 1067 ntBASIC14.36□□□□□ -0.11
Cacnb3P54285 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.36□□□□□ -0.11
Cacnb3P54285 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.36□□□□□ -0.11
Cacnb3P54285 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cacnb3P54285 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Cacnb3P54285 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.36□□□□□ -0.11
Cacnb3P54285 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Cacnb3P54285 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacnb3P54285 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.36□□□□□ -0.11
Cacnb3P54285 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.35□□□□□ -0.11
Cacnb3P54285 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Cacnb3P54285 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Gm13888-201ENSMUST00000119148 422 ntBASIC14.35□□□□□ -0.11
Cacnb3P54285 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cacnb3P54285 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.35□□□□□ -0.11
Cacnb3P54285 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.35□□□□□ -0.11
Cacnb3P54285 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.35□□□□□ -0.11
Cacnb3P54285 Mir7686-201ENSMUST00000200604 57 ntBASIC14.35□□□□□ -0.11
Cacnb3P54285 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.35□□□□□ -0.11
Cacnb3P54285 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.35□□□□□ -0.11
Cacnb3P54285 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cacnb3P54285 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms