Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sox1P53783 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.61□□□□□ -0.39
Sox1P53783 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Gm37852-201ENSMUST00000193027 350 ntBASIC12.61□□□□□ -0.39
Sox1P53783 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.61□□□□□ -0.39
Sox1P53783 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.61□□□□□ -0.39
Sox1P53783 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.61□□□□□ -0.39
Sox1P53783 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 AC154572.1-201ENSMUST00000226098 1204 ntBASIC12.61□□□□□ -0.39
Sox1P53783 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Gm16380-201ENSMUST00000077997 478 ntBASIC12.61□□□□□ -0.39
Sox1P53783 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Sox1P53783 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Sox1P53783 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sox1P53783 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox1P53783 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox1P53783 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox1P53783 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Sox1P53783 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox1P53783 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sox1P53783 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Sox1P53783 AC137950.2-202ENSMUST00000227150 1635 ntBASIC12.6□□□□□ -0.39
Sox1P53783 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox1P53783 Gm14716-201ENSMUST00000120138 718 ntBASIC12.6□□□□□ -0.39
Sox1P53783 Gm13263-201ENSMUST00000121271 838 ntBASIC12.6□□□□□ -0.39
Sox1P53783 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox1P53783 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.6□□□□□ -0.39
Sox1P53783 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC12.6□□□□□ -0.39
Sox1P53783 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.6□□□□□ -0.39
Sox1P53783 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox1P53783 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.6□□□□□ -0.39
Sox1P53783 Gm3433-201ENSMUST00000210149 1058 ntBASIC12.6□□□□□ -0.39
Sox1P53783 Gm45575-201ENSMUST00000210283 548 ntBASIC12.6□□□□□ -0.39
Sox1P53783 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox1P53783 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.6□□□□□ -0.39
Sox1P53783 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.6□□□□□ -0.39
Sox1P53783 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.6□□□□□ -0.39
Sox1P53783 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox1P53783 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox1P53783 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sox1P53783 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox1P53783 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox1P53783 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox1P53783 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox1P53783 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sox1P53783 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox1P53783 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sox1P53783 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox1P53783 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sox1P53783 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Sox1P53783 Gm3283-201ENSMUST00000199319 1350 ntBASIC12.59□□□□□ -0.39
Sox1P53783 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox1P53783 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Sox1P53783 Gm11663-201ENSMUST00000117888 290 ntBASIC12.59□□□□□ -0.39
Sox1P53783 Gm13351-201ENSMUST00000118087 414 ntBASIC12.59□□□□□ -0.39
Sox1P53783 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sox1P53783 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox1P53783 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Sox1P53783 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox1P53783 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC12.59□□□□□ -0.39
Sox1P53783 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sox1P53783 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.59□□□□□ -0.39
Sox1P53783 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Sox1P53783 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.59□□□□□ -0.39
Sox1P53783 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sox1P53783 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sox1P53783 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms