Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.98□□□□□ -0.33
Rfx2P48379 Gm44124-201ENSMUST00000204159 472 ntBASIC12.98□□□□□ -0.33
Rfx2P48379 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Rfx2P48379 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.98□□□□□ -0.33
Rfx2P48379 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.98□□□□□ -0.33
Rfx2P48379 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Rfx2P48379 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rfx2P48379 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rfx2P48379 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rfx2P48379 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rfx2P48379 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rfx2P48379 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rfx2P48379 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.97□□□□□ -0.33
Rfx2P48379 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.97□□□□□ -0.33
Rfx2P48379 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Rfx2P48379 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.97□□□□□ -0.33
Rfx2P48379 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.97□□□□□ -0.33
Rfx2P48379 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rfx2P48379 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rfx2P48379 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.97□□□□□ -0.33
Rfx2P48379 Gm16296-201ENSMUST00000159905 325 ntBASIC12.97□□□□□ -0.33
Rfx2P48379 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.97□□□□□ -0.33
Rfx2P48379 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.97□□□□□ -0.33
Rfx2P48379 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.97□□□□□ -0.33
Rfx2P48379 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Rfx2P48379 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.97□□□□□ -0.33
Rfx2P48379 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.97□□□□□ -0.33
Rfx2P48379 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rfx2P48379 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rfx2P48379 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.97□□□□□ -0.33
Rfx2P48379 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rfx2P48379 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rfx2P48379 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx2P48379 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.96□□□□□ -0.33
Rfx2P48379 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Rfx2P48379 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Rfx2P48379 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx2P48379 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx2P48379 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rfx2P48379 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx2P48379 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Rfx2P48379 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx2P48379 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.96□□□□□ -0.33
Rfx2P48379 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx2P48379 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.96□□□□□ -0.33
Rfx2P48379 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rfx2P48379 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Rfx2P48379 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rfx2P48379 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx2P48379 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx2P48379 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx2P48379 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Rfx2P48379 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx2P48379 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.96□□□□□ -0.33
Rfx2P48379 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx2P48379 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx2P48379 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.96□□□□□ -0.33
Rfx2P48379 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx2P48379 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rfx2P48379 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rfx2P48379 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.96□□□□□ -0.33
Rfx2P48379 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms