Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps4bP46467 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.55□□□□□ -0.4
Vps4bP46467 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.54□□□□□ -0.4
Vps4bP46467 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.54□□□□□ -0.4
Vps4bP46467 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.54□□□□□ -0.4
Vps4bP46467 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.54□□□□□ -0.4
Vps4bP46467 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Vps4bP46467 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.54□□□□□ -0.4
Vps4bP46467 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.54□□□□□ -0.4
Vps4bP46467 Gm16177-201ENSMUST00000120728 718 ntBASIC12.54□□□□□ -0.4
Vps4bP46467 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.54□□□□□ -0.4
Vps4bP46467 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Vps4bP46467 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.54□□□□□ -0.4
Vps4bP46467 Gm27682-201ENSMUST00000183930 110 ntBASIC12.54□□□□□ -0.4
Vps4bP46467 Gm27243-201ENSMUST00000183964 521 ntBASIC12.54□□□□□ -0.4
Vps4bP46467 Gm18584-201ENSMUST00000203098 964 ntBASIC12.54□□□□□ -0.4
Vps4bP46467 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.54□□□□□ -0.4
Vps4bP46467 Gm44882-201ENSMUST00000205702 802 ntBASIC12.54□□□□□ -0.4
Vps4bP46467 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.54□□□□□ -0.4
Vps4bP46467 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vps4bP46467 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.54□□□□□ -0.4
Vps4bP46467 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.54□□□□□ -0.4
Vps4bP46467 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.54□□□□□ -0.4
Vps4bP46467 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps4bP46467 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Vps4bP46467 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.53□□□□□ -0.4
Vps4bP46467 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Vps4bP46467 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Vps4bP46467 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.53□□□□□ -0.4
Vps4bP46467 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.53□□□□□ -0.4
Vps4bP46467 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.53□□□□□ -0.4
Vps4bP46467 Gm29127-201ENSMUST00000188304 517 ntBASIC12.53□□□□□ -0.4
Vps4bP46467 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vps4bP46467 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.53□□□□□ -0.4
Vps4bP46467 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.53□□□□□ -0.4
Vps4bP46467 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.53□□□□□ -0.4
Vps4bP46467 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vps4bP46467 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Vps4bP46467 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Vps4bP46467 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Vps4bP46467 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Vps4bP46467 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.53□□□□□ -0.4
Vps4bP46467 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps4bP46467 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Vps4bP46467 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms