Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox18P43680 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.01□□□□□ -0.49
Sox18P43680 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC12.01□□□□□ -0.49
Sox18P43680 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.01□□□□□ -0.49
Sox18P43680 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox18P43680 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox18P43680 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox18P43680 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.01□□□□□ -0.49
Sox18P43680 AC165260.4-201ENSMUST00000225924 724 ntBASIC12.01□□□□□ -0.49
Sox18P43680 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox18P43680 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox18P43680 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox18P43680 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox18P43680 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox18P43680 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12□□□□□ -0.49
Sox18P43680 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12□□□□□ -0.49
Sox18P43680 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12□□□□□ -0.49
Sox18P43680 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Sox18P43680 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sox18P43680 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12□□□□□ -0.49
Sox18P43680 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Sox18P43680 Rmrp-201ENSMUST00000157463 271 ntBASIC12□□□□□ -0.49
Sox18P43680 Gm25653-201ENSMUST00000158473 138 ntBASIC12□□□□□ -0.49
Sox18P43680 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Sox18P43680 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12□□□□□ -0.49
Sox18P43680 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sox18P43680 Gm5616-201ENSMUST00000165252 384 ntBASIC12□□□□□ -0.49
Sox18P43680 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12□□□□□ -0.49
Sox18P43680 Gm8741-201ENSMUST00000174736 384 ntBASIC12□□□□□ -0.49
Sox18P43680 Gm23153-201ENSMUST00000175323 313 ntBASIC12□□□□□ -0.49
Sox18P43680 Gm8492-201ENSMUST00000182375 987 ntBASIC12□□□□□ -0.49
Sox18P43680 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC12□□□□□ -0.49
Sox18P43680 Gm28438-201ENSMUST00000188299 345 ntBASIC12□□□□□ -0.49
Sox18P43680 Gm37469-201ENSMUST00000193728 890 ntBASIC12□□□□□ -0.49
Sox18P43680 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
Sox18P43680 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12□□□□□ -0.49
Sox18P43680 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 AC159205.5-202ENSMUST00000224849 386 ntBASIC12□□□□□ -0.49
Sox18P43680 AC174797.2-202ENSMUST00000225729 568 ntBASIC12□□□□□ -0.49
Sox18P43680 AL732506.1-201ENSMUST00000226420 281 ntBASIC12□□□□□ -0.49
Sox18P43680 Gm1821-202ENSMUST00000227415 750 ntBASIC12□□□□□ -0.49
Sox18P43680 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC12□□□□□ -0.49
Sox18P43680 Gm10076-201ENSMUST00000073238 384 ntBASIC12□□□□□ -0.49
Sox18P43680 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12□□□□□ -0.49
Sox18P43680 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12□□□□□ -0.49
Sox18P43680 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Gm6992-201ENSMUST00000217973 1607 ntBASIC12□□□□□ -0.49
Sox18P43680 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sox18P43680 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Sox18P43680 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Sox18P43680 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC12□□□□□ -0.49
Sox18P43680 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox18P43680 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Sox18P43680 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sox18P43680 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox18P43680 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms