Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HttP42859 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HttP42859 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HttP42859 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HttP42859 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HttP42859 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HttP42859 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HttP42859 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.73□□□□□ -0.37
HttP42859 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Gm11736-201ENSMUST00000121468 505 ntBASIC12.73□□□□□ -0.37
HttP42859 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Gm26272-201ENSMUST00000179241 132 ntBASIC12.73□□□□□ -0.37
HttP42859 Gm18035-201ENSMUST00000211962 589 ntBASIC12.73□□□□□ -0.37
HttP42859 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
HttP42859 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC12.73□□□□□ -0.37
HttP42859 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.73□□□□□ -0.37
HttP42859 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
HttP42859 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.73□□□□□ -0.37
HttP42859 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.73□□□□□ -0.37
HttP42859 Gm8152-201ENSMUST00000120842 637 ntBASIC12.73□□□□□ -0.37
HttP42859 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC12.73□□□□□ -0.37
HttP42859 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC12.73□□□□□ -0.37
HttP42859 Gm43726-201ENSMUST00000199110 775 ntBASIC12.73□□□□□ -0.37
HttP42859 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.73□□□□□ -0.37
HttP42859 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HttP42859 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HttP42859 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
HttP42859 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.72□□□□□ -0.37
HttP42859 Gm11475-201ENSMUST00000118482 476 ntBASIC12.72□□□□□ -0.37
HttP42859 Gm12345-201ENSMUST00000119288 898 ntBASIC12.72□□□□□ -0.37
HttP42859 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Gm2474-201ENSMUST00000195162 559 ntBASIC12.72□□□□□ -0.37
HttP42859 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC12.72□□□□□ -0.37
HttP42859 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.72□□□□□ -0.37
HttP42859 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 AC154354.1-203ENSMUST00000225565 1364 ntBASIC12.72□□□□□ -0.37
HttP42859 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HttP42859 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HttP42859 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Gm9791-201ENSMUST00000060997 447 ntBASIC12.72□□□□□ -0.37
HttP42859 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
HttP42859 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HttP42859 Gm12389-201ENSMUST00000117696 418 ntBASIC12.71□□□□□ -0.37
HttP42859 Gm14006-201ENSMUST00000122132 981 ntBASIC12.71□□□□□ -0.37
HttP42859 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.71□□□□□ -0.37
HttP42859 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HttP42859 Gm6450-201ENSMUST00000200896 574 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms