Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.82□□□□□ -0.68
Upk2P38575 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.82□□□□□ -0.68
Upk2P38575 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Upk2P38575 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.82□□□□□ -0.68
Upk2P38575 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Upk2P38575 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Upk2P38575 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.82□□□□□ -0.68
Upk2P38575 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.82□□□□□ -0.68
Upk2P38575 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.82□□□□□ -0.68
Upk2P38575 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Upk2P38575 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.82□□□□□ -0.68
Upk2P38575 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.82□□□□□ -0.68
Upk2P38575 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Upk2P38575 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.82□□□□□ -0.68
Upk2P38575 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.82□□□□□ -0.68
Upk2P38575 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.82□□□□□ -0.68
Upk2P38575 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Upk2P38575 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.81□□□□□ -0.68
Upk2P38575 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Gm13142-201ENSMUST00000117213 1453 ntBASIC10.81□□□□□ -0.68
Upk2P38575 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Upk2P38575 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.81□□□□□ -0.68
Upk2P38575 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Upk2P38575 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.81□□□□□ -0.68
Upk2P38575 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.81□□□□□ -0.68
Upk2P38575 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Upk2P38575 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Upk2P38575 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Upk2P38575 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.81□□□□□ -0.68
Upk2P38575 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Upk2P38575 Gm24934-201ENSMUST00000103764 111 ntBASIC10.81□□□□□ -0.68
Upk2P38575 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Upk2P38575 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Upk2P38575 Gm12957-201ENSMUST00000117835 377 ntBASIC10.81□□□□□ -0.68
Upk2P38575 Gm11793-201ENSMUST00000120433 981 ntBASIC10.81□□□□□ -0.68
Upk2P38575 Gm13786-201ENSMUST00000122371 333 ntBASIC10.81□□□□□ -0.68
Upk2P38575 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.81□□□□□ -0.68
Upk2P38575 Gm8062-201ENSMUST00000139696 444 ntBASIC10.81□□□□□ -0.68
Upk2P38575 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.81□□□□□ -0.68
Upk2P38575 Gm25043-201ENSMUST00000158604 212 ntBASIC10.81□□□□□ -0.68
Upk2P38575 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC10.81□□□□□ -0.68
Upk2P38575 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.81□□□□□ -0.68
Upk2P38575 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.81□□□□□ -0.68
Upk2P38575 Gm28882-201ENSMUST00000185504 314 ntBASIC10.81□□□□□ -0.68
Upk2P38575 Gm43118-201ENSMUST00000199149 775 ntBASIC10.81□□□□□ -0.68
Upk2P38575 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.81□□□□□ -0.68
Upk2P38575 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.81□□□□□ -0.68
Upk2P38575 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Upk2P38575 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Upk2P38575 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.81□□□□□ -0.68
Upk2P38575 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Upk2P38575 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Upk2P38575 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.81□□□□□ -0.68
Upk2P38575 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.81□□□□□ -0.68
Upk2P38575 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Upk2P38575 Cog3-203ENSMUST00000227473 4197 ntBASIC10.8□□□□□ -0.68
Upk2P38575 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Upk2P38575 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Upk2P38575 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.8□□□□□ -0.68
Upk2P38575 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Upk2P38575 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Upk2P38575 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms