Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Thbs1P35441 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs1P35441 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs1P35441 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Thbs1P35441 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs1P35441 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.49□□□□□ -0.57
Thbs1P35441 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs1P35441 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs1P35441 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.49□□□□□ -0.57
Thbs1P35441 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs1P35441 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Thbs1P35441 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs1P35441 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs1P35441 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs1P35441 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs1P35441 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs1P35441 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Thbs1P35441 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Thbs1P35441 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Thbs1P35441 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Thbs1P35441 Gm25261-201ENSMUST00000157416 134 ntBASIC11.48□□□□□ -0.57
Thbs1P35441 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.48□□□□□ -0.57
Thbs1P35441 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Gm18054-201ENSMUST00000207539 555 ntBASIC11.48□□□□□ -0.57
Thbs1P35441 Gm19309-201ENSMUST00000218295 205 ntBASIC11.48□□□□□ -0.57
Thbs1P35441 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.48□□□□□ -0.57
Thbs1P35441 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.48□□□□□ -0.57
Thbs1P35441 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.48□□□□□ -0.57
Thbs1P35441 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Thbs1P35441 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Thbs1P35441 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Matn2-203ENSMUST00000226766 3252 ntBASIC11.48□□□□□ -0.57
Thbs1P35441 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Thbs1P35441 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Thbs1P35441 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Thbs1P35441 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Thbs1P35441 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.47□□□□□ -0.57
Thbs1P35441 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.47□□□□□ -0.57
Thbs1P35441 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Thbs1P35441 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Thbs1P35441 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.47□□□□□ -0.57
Thbs1P35441 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.47□□□□□ -0.57
Thbs1P35441 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Gm13183-201ENSMUST00000118615 789 ntBASIC11.47□□□□□ -0.57
Thbs1P35441 Gm13342-201ENSMUST00000121055 207 ntBASIC11.47□□□□□ -0.57
Thbs1P35441 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Thbs1P35441 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Thbs1P35441 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.47□□□□□ -0.57
Thbs1P35441 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.47□□□□□ -0.57
Thbs1P35441 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Thbs1P35441 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Thbs1P35441 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Thbs1P35441 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms