Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Mmp13P33435 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.65□□□□□ -0.38
Mmp13P33435 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Gm25927-201ENSMUST00000175058 117 ntBASIC12.65□□□□□ -0.38
Mmp13P33435 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Gm37042-201ENSMUST00000193816 581 ntBASIC12.65□□□□□ -0.38
Mmp13P33435 Gm42693-201ENSMUST00000196779 631 ntBASIC12.65□□□□□ -0.38
Mmp13P33435 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.65□□□□□ -0.38
Mmp13P33435 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.65□□□□□ -0.38
Mmp13P33435 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Mmp13P33435 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.65□□□□□ -0.38
Mmp13P33435 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Mmp13P33435 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Mmp13P33435 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Mmp13P33435 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Mmp13P33435 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.64□□□□□ -0.39
Mmp13P33435 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Mmp13P33435 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.64□□□□□ -0.39
Mmp13P33435 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Mmp13P33435 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.64□□□□□ -0.39
Mmp13P33435 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.64□□□□□ -0.39
Mmp13P33435 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.64□□□□□ -0.39
Mmp13P33435 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.64□□□□□ -0.39
Mmp13P33435 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.64□□□□□ -0.39
Mmp13P33435 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.64□□□□□ -0.39
Mmp13P33435 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.64□□□□□ -0.39
Mmp13P33435 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.64□□□□□ -0.39
Mmp13P33435 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.64□□□□□ -0.39
Mmp13P33435 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Mmp13P33435 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Mmp13P33435 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Mmp13P33435 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Mmp13P33435 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Mmp13P33435 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Mmp13P33435 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.63□□□□□ -0.39
Mmp13P33435 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Gm24231-201ENSMUST00000104315 133 ntBASIC12.63□□□□□ -0.39
Mmp13P33435 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.63□□□□□ -0.39
Mmp13P33435 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.63□□□□□ -0.39
Mmp13P33435 Gm16379-201ENSMUST00000161469 348 ntBASIC12.63□□□□□ -0.39
Mmp13P33435 Gm8762-201ENSMUST00000193486 339 ntBASIC12.63□□□□□ -0.39
Mmp13P33435 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.63□□□□□ -0.39
Mmp13P33435 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Mmp13P33435 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Mmp13P33435 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Mmp13P33435 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Rubie-203ENSMUST00000227803 2430 ntBASIC12.63□□□□□ -0.39
Mmp13P33435 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.63□□□□□ -0.39
Mmp13P33435 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Mmp13P33435 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms