Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.75□□□□□ -0.85
Rom1P32958 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC9.75□□□□□ -0.85
Rom1P32958 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 AC154527.2-201ENSMUST00000225256 1466 ntBASIC9.75□□□□□ -0.85
Rom1P32958 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Rom1P32958 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Rom1P32958 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Gm13223-201ENSMUST00000118609 747 ntBASIC9.75□□□□□ -0.85
Rom1P32958 Gm16296-201ENSMUST00000159905 325 ntBASIC9.75□□□□□ -0.85
Rom1P32958 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC9.75□□□□□ -0.85
Rom1P32958 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Gm31326-201ENSMUST00000191856 1048 ntBASIC9.75□□□□□ -0.85
Rom1P32958 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 AC133598.3-202ENSMUST00000224219 531 ntBASIC9.75□□□□□ -0.85
Rom1P32958 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC9.75□□□□□ -0.85
Rom1P32958 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Rom1P32958 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC9.75□□□□□ -0.85
Rom1P32958 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.75□□□□□ -0.85
Rom1P32958 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Rom1P32958 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC9.74□□□□□ -0.85
Rom1P32958 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.74□□□□□ -0.85
Rom1P32958 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Rom1P32958 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC9.74□□□□□ -0.85
Rom1P32958 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Gm11618-201ENSMUST00000117946 267 ntBASIC9.74□□□□□ -0.85
Rom1P32958 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC9.74□□□□□ -0.85
Rom1P32958 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.74□□□□□ -0.85
Rom1P32958 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.74□□□□□ -0.85
Rom1P32958 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.74□□□□□ -0.85
Rom1P32958 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Rom1P32958 Cdk7-205ENSMUST00000225990 1159 ntBASIC9.74□□□□□ -0.85
Rom1P32958 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Rom1P32958 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Rom1P32958 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Gm43102-201ENSMUST00000201004 2324 ntBASIC9.74□□□□□ -0.85
Rom1P32958 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC9.74□□□□□ -0.85
Rom1P32958 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
Rom1P32958 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Rom1P32958 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Rom1P32958 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Rom1P32958 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Rom1P32958 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.73□□□□□ -0.85
Rom1P32958 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rom1P32958 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms