Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vcam1P29533 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.14□□□□□ -0.15
Vcam1P29533 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Vcam1P29533 Gm13461-201ENSMUST00000120980 662 ntBASIC14.14□□□□□ -0.15
Vcam1P29533 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.14□□□□□ -0.15
Vcam1P29533 Gm4034-201ENSMUST00000187674 480 ntBASIC14.14□□□□□ -0.15
Vcam1P29533 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.14□□□□□ -0.15
Vcam1P29533 Gm44126-201ENSMUST00000204831 514 ntBASIC14.14□□□□□ -0.15
Vcam1P29533 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.14□□□□□ -0.15
Vcam1P29533 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.14□□□□□ -0.15
Vcam1P29533 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vcam1P29533 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vcam1P29533 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vcam1P29533 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vcam1P29533 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC14.13□□□□□ -0.15
Vcam1P29533 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vcam1P29533 AC173482.6-201ENSMUST00000225889 1741 ntBASIC14.13□□□□□ -0.15
Vcam1P29533 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.13□□□□□ -0.15
Vcam1P29533 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vcam1P29533 Gm24891-201ENSMUST00000104391 136 ntBASIC14.13□□□□□ -0.15
Vcam1P29533 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.13□□□□□ -0.15
Vcam1P29533 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vcam1P29533 Gm28686-201ENSMUST00000187404 609 ntBASIC14.13□□□□□ -0.15
Vcam1P29533 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.13□□□□□ -0.15
Vcam1P29533 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC14.13□□□□□ -0.15
Vcam1P29533 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vcam1P29533 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.13□□□□□ -0.15
Vcam1P29533 Gm10288-201ENSMUST00000084614 537 ntBASIC14.13□□□□□ -0.15
Vcam1P29533 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.13□□□□□ -0.15
Vcam1P29533 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Vcam1P29533 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Vcam1P29533 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Vcam1P29533 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vcam1P29533 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.12□□□□□ -0.15
Vcam1P29533 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.12□□□□□ -0.15
Vcam1P29533 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Vcam1P29533 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.12□□□□□ -0.15
Vcam1P29533 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.12□□□□□ -0.15
Vcam1P29533 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.12□□□□□ -0.15
Vcam1P29533 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.12□□□□□ -0.15
Vcam1P29533 Gm3508-201ENSMUST00000186012 792 ntBASIC14.12□□□□□ -0.15
Vcam1P29533 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.12□□□□□ -0.15
Vcam1P29533 Mir7686-201ENSMUST00000200604 57 ntBASIC14.12□□□□□ -0.15
Vcam1P29533 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Gm8285-201ENSMUST00000208293 759 ntBASIC14.12□□□□□ -0.15
Vcam1P29533 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.12□□□□□ -0.15
Vcam1P29533 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vcam1P29533 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms