Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.63□□□□□ -0.87
Ccl6P27784 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl6P27784 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC9.63□□□□□ -0.87
Ccl6P27784 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.63□□□□□ -0.87
Ccl6P27784 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.63□□□□□ -0.87
Ccl6P27784 AC166349.1-201ENSMUST00000220866 695 ntBASIC9.63□□□□□ -0.87
Ccl6P27784 AC169036.1-201ENSMUST00000227994 296 ntBASIC9.63□□□□□ -0.87
Ccl6P27784 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl6P27784 Snora73a-201ENSMUST00000082453 205 ntBASIC9.63□□□□□ -0.87
Ccl6P27784 n-R5s195-201ENSMUST00000082891 119 ntBASIC9.63□□□□□ -0.87
Ccl6P27784 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl6P27784 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl6P27784 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl6P27784 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.63□□□□□ -0.87
Ccl6P27784 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl6P27784 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl6P27784 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl6P27784 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl6P27784 Retreg1-206ENSMUST00000228306 1430 ntBASIC9.63□□□□□ -0.87
Ccl6P27784 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Ccl6P27784 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl6P27784 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl6P27784 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Ccl6P27784 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Ccl6P27784 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC9.62□□□□□ -0.87
Ccl6P27784 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.62□□□□□ -0.87
Ccl6P27784 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Gm13492-201ENSMUST00000119772 665 ntBASIC9.62□□□□□ -0.87
Ccl6P27784 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9.62□□□□□ -0.87
Ccl6P27784 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC9.62□□□□□ -0.87
Ccl6P27784 Rmrp-201ENSMUST00000157463 271 ntBASIC9.62□□□□□ -0.87
Ccl6P27784 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC9.62□□□□□ -0.87
Ccl6P27784 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Gm45880-201ENSMUST00000213041 853 ntBASIC9.62□□□□□ -0.87
Ccl6P27784 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC9.62□□□□□ -0.87
Ccl6P27784 AL732506.1-201ENSMUST00000226420 281 ntBASIC9.62□□□□□ -0.87
Ccl6P27784 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Ccl6P27784 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Ccl6P27784 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Ccl6P27784 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Ccl6P27784 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ccl6P27784 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Ccl6P27784 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Ccl6P27784 Gm23931-201ENSMUST00000103842 109 ntBASIC9.61□□□□□ -0.87
Ccl6P27784 Gm24231-201ENSMUST00000104315 133 ntBASIC9.61□□□□□ -0.87
Ccl6P27784 Gm22018-201ENSMUST00000104357 131 ntBASIC9.61□□□□□ -0.87
Ccl6P27784 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC9.61□□□□□ -0.87
Ccl6P27784 Gm11597-201ENSMUST00000121423 964 ntBASIC9.61□□□□□ -0.87
Ccl6P27784 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Ccl6P27784 Gm9022-201ENSMUST00000182482 992 ntBASIC9.61□□□□□ -0.87
Ccl6P27784 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC9.61□□□□□ -0.87
Ccl6P27784 Gm44405-201ENSMUST00000198952 126 ntBASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms