Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
SnrpbP27048 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Cog3-203ENSMUST00000227473 4197 ntBASIC11.11□□□□□ -0.63
SnrpbP27048 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SnrpbP27048 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
SnrpbP27048 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SnrpbP27048 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.11□□□□□ -0.63
SnrpbP27048 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Clec12b-202ENSMUST00000112082 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SnrpbP27048 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SnrpbP27048 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.1□□□□□ -0.63
SnrpbP27048 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.1□□□□□ -0.63
SnrpbP27048 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.1□□□□□ -0.63
SnrpbP27048 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SnrpbP27048 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
SnrpbP27048 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC11.1□□□□□ -0.63
SnrpbP27048 Gm11978-201ENSMUST00000122315 466 ntBASIC11.1□□□□□ -0.63
SnrpbP27048 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Asb4-202ENSMUST00000183358 1143 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Gm27390-201ENSMUST00000184516 176 ntBASIC11.1□□□□□ -0.63
SnrpbP27048 Gm18356-201ENSMUST00000185677 623 ntBASIC11.1□□□□□ -0.63
SnrpbP27048 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.1□□□□□ -0.63
SnrpbP27048 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC11.1□□□□□ -0.63
SnrpbP27048 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC11.1□□□□□ -0.63
SnrpbP27048 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC11.1□□□□□ -0.63
SnrpbP27048 Gm42550-201ENSMUST00000201553 960 ntBASIC11.1□□□□□ -0.63
SnrpbP27048 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC11.1□□□□□ -0.63
SnrpbP27048 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.1□□□□□ -0.63
SnrpbP27048 Gm19078-201ENSMUST00000206311 727 ntBASIC11.1□□□□□ -0.63
SnrpbP27048 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.1□□□□□ -0.63
SnrpbP27048 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC11.1□□□□□ -0.63
SnrpbP27048 AC154515.3-201ENSMUST00000225081 1159 ntBASIC11.1□□□□□ -0.63
SnrpbP27048 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SnrpbP27048 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC11.1□□□□□ -0.63
SnrpbP27048 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SnrpbP27048 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SnrpbP27048 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.1□□□□□ -0.63
SnrpbP27048 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SnrpbP27048 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SnrpbP27048 Gm44897-201ENSMUST00000206187 1341 ntBASIC11.09□□□□□ -0.63
SnrpbP27048 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.09□□□□□ -0.63
SnrpbP27048 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SnrpbP27048 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SnrpbP27048 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SnrpbP27048 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms