Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfrsf1bP25119 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfrsf1bP25119 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfrsf1bP25119 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfrsf1bP25119 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfrsf1bP25119 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfrsf1bP25119 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfrsf1bP25119 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Tnfrsf1bP25119 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.46□□□□□ -0.58
Tnfrsf1bP25119 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Tnfrsf1bP25119 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Gm24255-201ENSMUST00000104481 128 ntBASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Gm23119-201ENSMUST00000158610 140 ntBASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Gm43377-201ENSMUST00000201640 455 ntBASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Tnfrsf1bP25119 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Gm14832-201ENSMUST00000121289 322 ntBASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Gm24845-201ENSMUST00000158034 109 ntBASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Gm20482-202ENSMUST00000174729 825 ntBASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Gm27320-201ENSMUST00000184892 109 ntBASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Tnfrsf1bP25119 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms