Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Cdx1P18111 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.03□□□□□ -0.8
Cdx1P18111 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.03□□□□□ -0.8
Cdx1P18111 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Cdx1P18111 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cdx1P18111 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cdx1P18111 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cdx1P18111 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cdx1P18111 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.8
Cdx1P18111 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Cdx1P18111 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.02□□□□□ -0.8
Cdx1P18111 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.02□□□□□ -0.81
Cdx1P18111 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Mir1982-201ENSMUST00000157368 74 ntBASIC10.02□□□□□ -0.81
Cdx1P18111 Gm27486-201ENSMUST00000184923 80 ntBASIC10.02□□□□□ -0.81
Cdx1P18111 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Gm43630-201ENSMUST00000201550 776 ntBASIC10.02□□□□□ -0.81
Cdx1P18111 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.02□□□□□ -0.81
Cdx1P18111 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.02□□□□□ -0.81
Cdx1P18111 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.02□□□□□ -0.81
Cdx1P18111 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cdx1P18111 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Cdx1P18111 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Cdx1P18111 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Cdx1P18111 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Cdx1P18111 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.01□□□□□ -0.81
Cdx1P18111 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Cdx1P18111 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Gm24420-201ENSMUST00000176676 59 ntBASIC10.01□□□□□ -0.81
Cdx1P18111 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.01□□□□□ -0.81
Cdx1P18111 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.01□□□□□ -0.81
Cdx1P18111 Gm19078-201ENSMUST00000206311 727 ntBASIC10.01□□□□□ -0.81
Cdx1P18111 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.01□□□□□ -0.81
Cdx1P18111 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdx1P18111 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.01□□□□□ -0.81
Cdx1P18111 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Cdx1P18111 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Cdx1P18111 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdx1P18111 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdx1P18111 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.01□□□□□ -0.81
Cdx1P18111 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.01□□□□□ -0.81
Cdx1P18111 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Cdx1P18111 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Cdx1P18111 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cdx1P18111 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms