Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hmga1P17095 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hmga1P17095 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.57□□□□□ -0.4
Hmga1P17095 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.57□□□□□ -0.4
Hmga1P17095 Gm11509-201ENSMUST00000117358 325 ntBASIC12.57□□□□□ -0.4
Hmga1P17095 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.57□□□□□ -0.4
Hmga1P17095 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.57□□□□□ -0.4
Hmga1P17095 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.57□□□□□ -0.4
Hmga1P17095 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.57□□□□□ -0.4
Hmga1P17095 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.57□□□□□ -0.4
Hmga1P17095 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.57□□□□□ -0.4
Hmga1P17095 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.57□□□□□ -0.4
Hmga1P17095 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.57□□□□□ -0.4
Hmga1P17095 Gm43378-201ENSMUST00000199336 582 ntBASIC12.57□□□□□ -0.4
Hmga1P17095 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Hmga1P17095 Gm9555-201ENSMUST00000200908 583 ntBASIC12.57□□□□□ -0.4
Hmga1P17095 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.57□□□□□ -0.4
Hmga1P17095 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.57□□□□□ -0.4
Hmga1P17095 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.57□□□□□ -0.4
Hmga1P17095 Gm26448-201ENSMUST00000082446 203 ntBASIC12.57□□□□□ -0.4
Hmga1P17095 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.57□□□□□ -0.4
Hmga1P17095 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hmga1P17095 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hmga1P17095 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmga1P17095 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hmga1P17095 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hmga1P17095 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Hmga1P17095 Gm13035-201ENSMUST00000117496 342 ntBASIC12.56□□□□□ -0.4
Hmga1P17095 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.56□□□□□ -0.4
Hmga1P17095 Gm25881-201ENSMUST00000157783 103 ntBASIC12.56□□□□□ -0.4
Hmga1P17095 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hmga1P17095 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.56□□□□□ -0.4
Hmga1P17095 Gm8343-201ENSMUST00000182705 994 ntBASIC12.56□□□□□ -0.4
Hmga1P17095 Gm4034-201ENSMUST00000187674 480 ntBASIC12.56□□□□□ -0.4
Hmga1P17095 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.56□□□□□ -0.4
Hmga1P17095 Gm3332-201ENSMUST00000189337 928 ntBASIC12.56□□□□□ -0.4
Hmga1P17095 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hmga1P17095 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.56□□□□□ -0.4
Hmga1P17095 Gm21811-201ENSMUST00000096485 930 ntBASIC12.56□□□□□ -0.4
Hmga1P17095 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.56□□□□□ -0.4
Hmga1P17095 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.56□□□□□ -0.4
Hmga1P17095 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.56□□□□□ -0.4
Hmga1P17095 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hmga1P17095 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.56□□□□□ -0.4
Hmga1P17095 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.56□□□□□ -0.4
Hmga1P17095 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmga1P17095 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hmga1P17095 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Hmga1P17095 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.55□□□□□ -0.4
Hmga1P17095 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmga1P17095 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmga1P17095 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmga1P17095 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms