Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.74□□□□□ -0.37
Rb1P13405 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Rb1P13405 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.74□□□□□ -0.37
Rb1P13405 Gm19208-201ENSMUST00000213861 912 ntBASIC12.74□□□□□ -0.37
Rb1P13405 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.74□□□□□ -0.37
Rb1P13405 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rb1P13405 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.74□□□□□ -0.37
Rb1P13405 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.74□□□□□ -0.37
Rb1P13405 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rb1P13405 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Rb1P13405 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rb1P13405 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rb1P13405 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rb1P13405 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rb1P13405 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.74□□□□□ -0.37
Rb1P13405 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rb1P13405 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rb1P13405 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rb1P13405 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rb1P13405 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rb1P13405 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Rb1P13405 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rb1P13405 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rb1P13405 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.73□□□□□ -0.37
Rb1P13405 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Gm4909-201ENSMUST00000118749 794 ntBASIC12.73□□□□□ -0.37
Rb1P13405 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.73□□□□□ -0.37
Rb1P13405 Gm15276-201ENSMUST00000145953 498 ntBASIC12.73□□□□□ -0.37
Rb1P13405 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Gm24990-201ENSMUST00000157406 323 ntBASIC12.73□□□□□ -0.37
Rb1P13405 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Rb1P13405 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Rb1P13405 Gm37986-201ENSMUST00000193285 383 ntBASIC12.73□□□□□ -0.37
Rb1P13405 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Gm45186-201ENSMUST00000206874 478 ntBASIC12.73□□□□□ -0.37
Rb1P13405 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.73□□□□□ -0.37
Rb1P13405 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.73□□□□□ -0.37
Rb1P13405 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rb1P13405 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rb1P13405 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Rb1P13405 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Rb1P13405 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rb1P13405 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.72□□□□□ -0.37
Rb1P13405 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rb1P13405 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Rb1P13405 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rb1P13405 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.72□□□□□ -0.37
Rb1P13405 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Rb1P13405 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.72□□□□□ -0.37
Rb1P13405 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rb1P13405 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.72□□□□□ -0.37
Rb1P13405 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.72□□□□□ -0.37
Rb1P13405 Gm38317-201ENSMUST00000195564 343 ntBASIC12.72□□□□□ -0.37
Rb1P13405 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Rb1P13405 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.72□□□□□ -0.37
Rb1P13405 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.72□□□□□ -0.37
Rb1P13405 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Rb1P13405 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Rb1P13405 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms