Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Hoxa4P06798 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.17□□□□□ -0.46
Hoxa4P06798 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxa4P06798 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.17□□□□□ -0.46
Hoxa4P06798 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxa4P06798 Gm13296-201ENSMUST00000117854 997 ntBASIC12.17□□□□□ -0.46
Hoxa4P06798 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.17□□□□□ -0.46
Hoxa4P06798 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.17□□□□□ -0.46
Hoxa4P06798 Gm14247-201ENSMUST00000120950 237 ntBASIC12.17□□□□□ -0.46
Hoxa4P06798 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.17□□□□□ -0.46
Hoxa4P06798 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Hoxa4P06798 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Hoxa4P06798 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hoxa4P06798 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.17□□□□□ -0.46
Hoxa4P06798 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxa4P06798 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxa4P06798 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxa4P06798 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.16□□□□□ -0.46
Hoxa4P06798 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hoxa4P06798 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hoxa4P06798 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Mir877-201ENSMUST00000104738 85 ntBASIC12.16□□□□□ -0.46
Hoxa4P06798 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Gm13996-201ENSMUST00000118456 430 ntBASIC12.16□□□□□ -0.46
Hoxa4P06798 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxa4P06798 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxa4P06798 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.16□□□□□ -0.46
Hoxa4P06798 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.16□□□□□ -0.46
Hoxa4P06798 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxa4P06798 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxa4P06798 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Hoxa4P06798 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hoxa4P06798 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxa4P06798 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hoxa4P06798 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Hoxa4P06798 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Hoxa4P06798 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxa4P06798 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.15□□□□□ -0.46
Hoxa4P06798 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.15□□□□□ -0.46
Hoxa4P06798 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Gm26361-201ENSMUST00000158868 186 ntBASIC12.15□□□□□ -0.46
Hoxa4P06798 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hoxa4P06798 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxa4P06798 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.15□□□□□ -0.46
Hoxa4P06798 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxa4P06798 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.15□□□□□ -0.46
Hoxa4P06798 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxa4P06798 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxa4P06798 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms