Protein–RNA interactions for Protein: P01800

Ig heavy chain V-III region T957, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01800 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.83□□□□□ -0.68
P01800 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
P01800 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
P01800 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.83□□□□□ -0.68
P01800 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
P01800 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
P01800 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
P01800 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.83□□□□□ -0.68
P01800 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.83□□□□□ -0.68
P01800 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
P01800 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Gm24644-201ENSMUST00000157114 139 ntBASIC10.83□□□□□ -0.68
P01800 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
P01800 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.83□□□□□ -0.68
P01800 Gm7561-201ENSMUST00000211203 886 ntBASIC10.83□□□□□ -0.68
P01800 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.83□□□□□ -0.68
P01800 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Gm10146-201ENSMUST00000072739 309 ntBASIC10.83□□□□□ -0.68
P01800 Gm6091-201ENSMUST00000098307 165 ntBASIC10.83□□□□□ -0.68
P01800 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.83□□□□□ -0.68
P01800 AC154517.2-201ENSMUST00000220829 2458 ntBASIC10.83□□□□□ -0.68
P01800 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.83□□□□□ -0.68
P01800 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.83□□□□□ -0.68
P01800 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
P01800 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
P01800 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.82□□□□□ -0.68
P01800 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.82□□□□□ -0.68
P01800 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
P01800 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
P01800 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
P01800 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
P01800 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.82□□□□□ -0.68
P01800 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
P01800 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Gm27331-201ENSMUST00000183705 60 ntBASIC10.82□□□□□ -0.68
P01800 Gm27731-201ENSMUST00000185192 107 ntBASIC10.82□□□□□ -0.68
P01800 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.82□□□□□ -0.68
P01800 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.82□□□□□ -0.68
P01800 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Gm4768-201ENSMUST00000206199 686 ntBASIC10.82□□□□□ -0.68
P01800 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Gm24526-201ENSMUST00000082921 158 ntBASIC10.82□□□□□ -0.68
P01800 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
P01800 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.82□□□□□ -0.68
P01800 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
P01800 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
P01800 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.82□□□□□ -0.68
P01800 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.82□□□□□ -0.68
P01800 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
P01800 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
P01800 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
P01800 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01800 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
P01800 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.81□□□□□ -0.68
P01800 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01800 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.81□□□□□ -0.68
P01800 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01800 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01800 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01800 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01800 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
P01800 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms