Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.25□□□□□ -0.45
Pdlim1O70400 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Pdlim1O70400 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.25□□□□□ -0.45
Pdlim1O70400 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pdlim1O70400 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.25□□□□□ -0.45
Pdlim1O70400 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pdlim1O70400 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pdlim1O70400 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Gm22323-201ENSMUST00000103832 109 ntBASIC12.24□□□□□ -0.45
Pdlim1O70400 Gm23270-201ENSMUST00000104055 131 ntBASIC12.24□□□□□ -0.45
Pdlim1O70400 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Pdlim1O70400 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.24□□□□□ -0.45
Pdlim1O70400 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.24□□□□□ -0.45
Pdlim1O70400 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pdlim1O70400 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.24□□□□□ -0.45
Pdlim1O70400 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pdlim1O70400 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.24□□□□□ -0.45
Pdlim1O70400 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.24□□□□□ -0.45
Pdlim1O70400 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.24□□□□□ -0.45
Pdlim1O70400 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pdlim1O70400 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.24□□□□□ -0.45
Pdlim1O70400 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pdlim1O70400 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pdlim1O70400 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Gm24830-201ENSMUST00000102024 166 ntBASIC12.23□□□□□ -0.45
Pdlim1O70400 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.23□□□□□ -0.45
Pdlim1O70400 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Gm20482-202ENSMUST00000174729 825 ntBASIC12.23□□□□□ -0.45
Pdlim1O70400 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.23□□□□□ -0.45
Pdlim1O70400 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.23□□□□□ -0.45
Pdlim1O70400 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.23□□□□□ -0.45
Pdlim1O70400 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Gm26232-201ENSMUST00000083360 166 ntBASIC12.23□□□□□ -0.45
Pdlim1O70400 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.23□□□□□ -0.45
Pdlim1O70400 Olfr582-201ENSMUST00000098212 960 ntBASIC12.23□□□□□ -0.45
Pdlim1O70400 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.23□□□□□ -0.45
Pdlim1O70400 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pdlim1O70400 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pdlim1O70400 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms