Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.27□□□□□ -0.45
Ldb2O55203 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.27□□□□□ -0.45
Ldb2O55203 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Ldb2O55203 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.27□□□□□ -0.45
Ldb2O55203 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Gm27516-201ENSMUST00000184237 98 ntBASIC12.27□□□□□ -0.45
Ldb2O55203 Mir8109-201ENSMUST00000184375 117 ntBASIC12.27□□□□□ -0.45
Ldb2O55203 Gm4034-201ENSMUST00000187674 480 ntBASIC12.27□□□□□ -0.45
Ldb2O55203 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.27□□□□□ -0.45
Ldb2O55203 Gm6621-201ENSMUST00000193251 772 ntBASIC12.27□□□□□ -0.45
Ldb2O55203 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.27□□□□□ -0.45
Ldb2O55203 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.27□□□□□ -0.45
Ldb2O55203 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.27□□□□□ -0.45
Ldb2O55203 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Gm26232-201ENSMUST00000083360 166 ntBASIC12.27□□□□□ -0.45
Ldb2O55203 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.27□□□□□ -0.45
Ldb2O55203 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Ldb2O55203 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.27□□□□□ -0.45
Ldb2O55203 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.27□□□□□ -0.45
Ldb2O55203 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.27□□□□□ -0.45
Ldb2O55203 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.27□□□□□ -0.45
Ldb2O55203 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ldb2O55203 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ldb2O55203 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Ldb2O55203 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.26□□□□□ -0.45
Ldb2O55203 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ldb2O55203 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ldb2O55203 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ldb2O55203 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.26□□□□□ -0.45
Ldb2O55203 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Ldb2O55203 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.26□□□□□ -0.45
Ldb2O55203 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ldb2O55203 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ldb2O55203 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Ldb2O55203 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ldb2O55203 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb2O55203 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ldb2O55203 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.25□□□□□ -0.45
Ldb2O55203 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb2O55203 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb2O55203 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ldb2O55203 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb2O55203 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ldb2O55203 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb2O55203 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ldb2O55203 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb2O55203 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ldb2O55203 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ldb2O55203 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ldb2O55203 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ldb2O55203 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ldb2O55203 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ldb2O55203 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb2O55203 Gm12241-201ENSMUST00000118330 726 ntBASIC12.25□□□□□ -0.45
Ldb2O55203 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.25□□□□□ -0.45
Ldb2O55203 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ldb2O55203 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ldb2O55203 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms