Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm14017-201ENSMUST00000121934 386 ntBASIC13.09□□□□□ -0.31
Itgb3O54890 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.09□□□□□ -0.31
Itgb3O54890 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.09□□□□□ -0.31
Itgb3O54890 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.09□□□□□ -0.31
Itgb3O54890 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.09□□□□□ -0.31
Itgb3O54890 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Itgb3O54890 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Itgb3O54890 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Itgb3O54890 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Itgb3O54890 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Itgb3O54890 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.31
Itgb3O54890 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.08□□□□□ -0.32
Itgb3O54890 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.08□□□□□ -0.32
Itgb3O54890 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.08□□□□□ -0.32
Itgb3O54890 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.08□□□□□ -0.32
Itgb3O54890 Gm2260-201ENSMUST00000184965 657 ntBASIC13.08□□□□□ -0.32
Itgb3O54890 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.08□□□□□ -0.32
Itgb3O54890 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Itgb3O54890 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.08□□□□□ -0.32
Itgb3O54890 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.08□□□□□ -0.32
Itgb3O54890 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.08□□□□□ -0.32
Itgb3O54890 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.08□□□□□ -0.32
Itgb3O54890 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Itgb3O54890 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Itgb3O54890 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.07□□□□□ -0.32
Itgb3O54890 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Itgb3O54890 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.07□□□□□ -0.32
Itgb3O54890 Gm11989-201ENSMUST00000117240 672 ntBASIC13.07□□□□□ -0.32
Itgb3O54890 Gm13996-201ENSMUST00000118456 430 ntBASIC13.07□□□□□ -0.32
Itgb3O54890 Gm11362-201ENSMUST00000118838 850 ntBASIC13.07□□□□□ -0.32
Itgb3O54890 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Itgb3O54890 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Itgb3O54890 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.07□□□□□ -0.32
Itgb3O54890 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC13.07□□□□□ -0.32
Itgb3O54890 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.07□□□□□ -0.32
Itgb3O54890 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.07□□□□□ -0.32
Itgb3O54890 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.07□□□□□ -0.32
Itgb3O54890 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Itgb3O54890 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Itgb3O54890 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Itgb3O54890 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms