Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Gm23931-201ENSMUST00000103842 109 ntBASIC12.49□□□□□ -0.41
ChkaO54804 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
ChkaO54804 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.49□□□□□ -0.41
ChkaO54804 Gm9083-201ENSMUST00000120423 819 ntBASIC12.49□□□□□ -0.41
ChkaO54804 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.49□□□□□ -0.41
ChkaO54804 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Gm3890-201ENSMUST00000182416 207 ntBASIC12.49□□□□□ -0.41
ChkaO54804 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.49□□□□□ -0.41
ChkaO54804 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.49□□□□□ -0.41
ChkaO54804 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.49□□□□□ -0.41
ChkaO54804 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.49□□□□□ -0.41
ChkaO54804 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
ChkaO54804 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
ChkaO54804 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
ChkaO54804 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.49□□□□□ -0.41
ChkaO54804 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ChkaO54804 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
ChkaO54804 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ChkaO54804 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.48□□□□□ -0.41
ChkaO54804 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.48□□□□□ -0.41
ChkaO54804 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ChkaO54804 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
ChkaO54804 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ChkaO54804 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.48□□□□□ -0.41
ChkaO54804 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.48□□□□□ -0.41
ChkaO54804 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
ChkaO54804 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Gm44405-201ENSMUST00000198952 126 ntBASIC12.48□□□□□ -0.41
ChkaO54804 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.48□□□□□ -0.41
ChkaO54804 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.48□□□□□ -0.41
ChkaO54804 Gm6007-201ENSMUST00000208170 823 ntBASIC12.48□□□□□ -0.41
ChkaO54804 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.48□□□□□ -0.41
ChkaO54804 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.48□□□□□ -0.41
ChkaO54804 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.48□□□□□ -0.41
ChkaO54804 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ChkaO54804 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ChkaO54804 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.48□□□□□ -0.41
ChkaO54804 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ChkaO54804 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ChkaO54804 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.48□□□□□ -0.41
ChkaO54804 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ChkaO54804 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ChkaO54804 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ChkaO54804 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.47□□□□□ -0.41
ChkaO54804 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ChkaO54804 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ChkaO54804 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms