Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pcdh9F8VPK8 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Gm13226-201ENSMUST00000117838 404 ntBASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Gm11425-201ENSMUST00000119608 498 ntBASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Gm45784-201ENSMUST00000188360 142 ntBASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Gm44405-201ENSMUST00000198952 126 ntBASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Gm5904-201ENSMUST00000210286 865 ntBASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Gm9396-201ENSMUST00000076703 567 ntBASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pcdh9F8VPK8 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Pcdh9F8VPK8 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.65□□□□□ -0.39
Pcdh9F8VPK8 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdh9F8VPK8 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdh9F8VPK8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdh9F8VPK8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Gm13736-201ENSMUST00000119272 253 ntBASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Gm14660-201ENSMUST00000119809 575 ntBASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Gm44958-201ENSMUST00000203734 736 ntBASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdh9F8VPK8 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdh9F8VPK8 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms