Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Gm24526-201ENSMUST00000082921 158 ntBASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Pcdh1F7BJK1 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Gm11803-201ENSMUST00000119966 444 ntBASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Gm8810-201ENSMUST00000172895 754 ntBASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Gm9022-201ENSMUST00000182482 992 ntBASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Gm25007-201ENSMUST00000083808 133 ntBASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pcdh1F7BJK1 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Gm45384-201ENSMUST00000210451 277 ntBASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Gm17794-201ENSMUST00000220252 955 ntBASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pcdh1F7BJK1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms