Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm6905-201ENSMUST00000205729 511 ntBASIC11.08□□□□□ -0.64
Shank1D3YZU1 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Gm45398-201ENSMUST00000210561 165 ntBASIC11.08□□□□□ -0.64
Shank1D3YZU1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.08□□□□□ -0.64
Shank1D3YZU1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Shank1D3YZU1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Shank1D3YZU1 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.07□□□□□ -0.64
Shank1D3YZU1 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Gm25880-201ENSMUST00000104331 132 ntBASIC11.07□□□□□ -0.64
Shank1D3YZU1 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.07□□□□□ -0.64
Shank1D3YZU1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.07□□□□□ -0.64
Shank1D3YZU1 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Gm17831-201ENSMUST00000205579 900 ntBASIC11.07□□□□□ -0.64
Shank1D3YZU1 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Gm2517-201ENSMUST00000215651 348 ntBASIC11.07□□□□□ -0.64
Shank1D3YZU1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.07□□□□□ -0.64
Shank1D3YZU1 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.07□□□□□ -0.64
Shank1D3YZU1 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.07□□□□□ -0.64
Shank1D3YZU1 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.07□□□□□ -0.64
Shank1D3YZU1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Shank1D3YZU1 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.06□□□□□ -0.64
Shank1D3YZU1 Gm11989-201ENSMUST00000117240 672 ntBASIC11.06□□□□□ -0.64
Shank1D3YZU1 Gm13809-201ENSMUST00000117921 597 ntBASIC11.06□□□□□ -0.64
Shank1D3YZU1 Gm11362-201ENSMUST00000118838 850 ntBASIC11.06□□□□□ -0.64
Shank1D3YZU1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Gm20392-201ENSMUST00000173047 701 ntBASIC11.06□□□□□ -0.64
Shank1D3YZU1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Gm8100-201ENSMUST00000182906 988 ntBASIC11.06□□□□□ -0.64
Shank1D3YZU1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.06□□□□□ -0.64
Shank1D3YZU1 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.06□□□□□ -0.64
Shank1D3YZU1 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.06□□□□□ -0.64
Shank1D3YZU1 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.06□□□□□ -0.64
Shank1D3YZU1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Shank1D3YZU1 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms