Protein–RNA interactions for Protein: B2RRE7

Otud4, OTU domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud4B2RRE7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Gm22323-201ENSMUST00000103832 109 ntBASIC11.75□□□□□ -0.53
Otud4B2RRE7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Gm20482-202ENSMUST00000174729 825 ntBASIC11.75□□□□□ -0.53
Otud4B2RRE7 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.75□□□□□ -0.53
Otud4B2RRE7 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Gm4768-201ENSMUST00000206199 686 ntBASIC11.75□□□□□ -0.53
Otud4B2RRE7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Otud4B2RRE7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.74□□□□□ -0.53
Otud4B2RRE7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.74□□□□□ -0.53
Otud4B2RRE7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Gm25668-201ENSMUST00000157700 129 ntBASIC11.74□□□□□ -0.53
Otud4B2RRE7 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.74□□□□□ -0.53
Otud4B2RRE7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Gm38158-201ENSMUST00000194617 339 ntBASIC11.74□□□□□ -0.53
Otud4B2RRE7 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Gm44124-201ENSMUST00000204159 472 ntBASIC11.74□□□□□ -0.53
Otud4B2RRE7 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.74□□□□□ -0.53
Otud4B2RRE7 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Otud4B2RRE7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otud4B2RRE7 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otud4B2RRE7 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otud4B2RRE7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Otud4B2RRE7 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Otud4B2RRE7 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms