Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Gm7537-201ENSMUST00000221660 1414 ntBASIC9.93□□□□□ -0.82
Chd6A3KFM7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Chd6A3KFM7 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Gm9644-201ENSMUST00000212828 1183 ntBASIC9.93□□□□□ -0.82
Chd6A3KFM7 AC152169.1-201ENSMUST00000223901 701 ntBASIC9.93□□□□□ -0.82
Chd6A3KFM7 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Shroom3-211ENSMUST00000225438 5742 ntBASIC9.93□□□□□ -0.82
Chd6A3KFM7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.93□□□□□ -0.82
Chd6A3KFM7 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
Chd6A3KFM7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Gm14752-201ENSMUST00000120719 2075 ntBASIC9.93□□□□□ -0.82
Chd6A3KFM7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd6A3KFM7 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Gm5071-201ENSMUST00000104922 1035 ntBASIC9.92□□□□□ -0.82
Chd6A3KFM7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Ighv5-1-201ENSMUST00000193324 353 ntBASIC9.92□□□□□ -0.82
Chd6A3KFM7 Gm5851-201ENSMUST00000194132 1204 ntBASIC9.92□□□□□ -0.82
Chd6A3KFM7 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC9.92□□□□□ -0.82
Chd6A3KFM7 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Gm5292-201ENSMUST00000073317 580 ntBASIC9.92□□□□□ -0.82
Chd6A3KFM7 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd6A3KFM7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm23912-201ENSMUST00000104687 87 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm9095-201ENSMUST00000117607 881 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm9097-201ENSMUST00000120514 880 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm10169-201ENSMUST00000121822 348 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Mir1905-201ENSMUST00000122779 82 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm26174-201ENSMUST00000158415 219 ntBASIC9.91□□□□□ -0.82
Chd6A3KFM7 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC9.91□□□□□ -0.82
Chd6A3KFM7 Gm18304-201ENSMUST00000189162 546 ntBASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms