Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc194A0A140LIT1 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Gm12502-201ENSMUST00000120197 444 ntBASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Gm9022-201ENSMUST00000182482 992 ntBASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Gm27682-201ENSMUST00000183930 110 ntBASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc194A0A140LIT1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc194A0A140LIT1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc194A0A140LIT1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc194A0A140LIT1 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc194A0A140LIT1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc194A0A140LIT1 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc194A0A140LIT1 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc194A0A140LIT1 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc194A0A140LIT1 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc194A0A140LIT1 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc194A0A140LIT1 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Ccdc194A0A140LIT1 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Gm8018-201ENSMUST00000173536 789 ntBASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Gm27243-201ENSMUST00000183964 521 ntBASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Gm42599-201ENSMUST00000201308 469 ntBASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Gm18584-201ENSMUST00000203098 964 ntBASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc194A0A140LIT1 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms