Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Map1b-203ENSMUST00000223725 2669 ntBASIC11.16□□□□□ -0.62
H2afb3S4R1G7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Snord83b-201ENSMUST00000104546 94 ntBASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Gm12384-201ENSMUST00000119228 919 ntBASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Gm16296-201ENSMUST00000159905 325 ntBASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Gm9794-201ENSMUST00000202370 423 ntBASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.16□□□□□ -0.62
H2afb3S4R1G7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Gm13492-201ENSMUST00000119772 665 ntBASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Gm14760-201ENSMUST00000121831 999 ntBASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Gm12138-201ENSMUST00000122180 951 ntBASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Rmrp-201ENSMUST00000157463 271 ntBASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Gm29649-201ENSMUST00000185649 419 ntBASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.15□□□□□ -0.62
H2afb3S4R1G7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
H2afb3S4R1G7 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.63
H2afb3S4R1G7 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
H2afb3S4R1G7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
H2afb3S4R1G7 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.15□□□□□ -0.63
H2afb3S4R1G7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Gm24231-201ENSMUST00000104315 133 ntBASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Gm27839-201ENSMUST00000184242 106 ntBASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.14□□□□□ -0.63
H2afb3S4R1G7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms