Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm8756-201ENSMUST00000183250 929 ntBASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.08□□□□□ -0.48
Col4a4Q9QZR9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Gm23255-201ENSMUST00000102244 110 ntBASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Mir744-201ENSMUST00000103261 100 ntBASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Gm7238-201ENSMUST00000206467 973 ntBASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Col4a4Q9QZR9 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Gm11996-201ENSMUST00000117538 915 ntBASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Gm21778-201ENSMUST00000178779 471 ntBASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Col4a4Q9QZR9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms