Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Smco4Q9JIS3 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Gm42466-201ENSMUST00000202099 1301 ntBASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Gm11557-201ENSMUST00000120200 1008 ntBASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Gm8927-201ENSMUST00000181978 981 ntBASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 AC158529.1-201ENSMUST00000223618 239 ntBASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Gm3222-201ENSMUST00000071282 990 ntBASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Gm10040-201ENSMUST00000080726 1662 ntBASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Smco4Q9JIS3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Gm12017-201ENSMUST00000122453 1003 ntBASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Smco4Q9JIS3 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms