Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Gm5523-201ENSMUST00000180415 997 ntBASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Gm43962-201ENSMUST00000203898 190 ntBASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Spcs1-203ENSMUST00000226374 592 ntBASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Stag1Q9D3E6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Gm11450-201ENSMUST00000121144 333 ntBASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.72□□□□□ -0.05
Stag1Q9D3E6 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Gm18038-201ENSMUST00000197900 485 ntBASIC14.72□□□□□ -0.05
Stag1Q9D3E6 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.72□□□□□ -0.05
Stag1Q9D3E6 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.71□□□□□ -0.05
Stag1Q9D3E6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Gm5525-201ENSMUST00000190438 1312 ntBASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.71□□□□□ -0.05
Stag1Q9D3E6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms