Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Gm44344-201ENSMUST00000200287 129 ntBASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
RTRAFQ9CQE8 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Mir686-201ENSMUST00000102174 109 ntBASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Mir449b-201ENSMUST00000104833 80 ntBASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Gm6458-201ENSMUST00000211573 635 ntBASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 AC140397.2-201ENSMUST00000224213 834 ntBASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
RTRAFQ9CQE8 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms