Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska1Q9CPV1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Gm14921-201ENSMUST00000118643 908 ntBASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Mir1894-201ENSMUST00000122802 81 ntBASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Gm42599-201ENSMUST00000201308 469 ntBASIC11.71□□□□□ -0.53
Ska1Q9CPV1 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ska1Q9CPV1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska1Q9CPV1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska1Q9CPV1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Ska1Q9CPV1 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska1Q9CPV1 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska1Q9CPV1 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska1Q9CPV1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska1Q9CPV1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Ska1Q9CPV1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.7□□□□□ -0.54
Ska1Q9CPV1 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.7□□□□□ -0.54
Ska1Q9CPV1 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.7□□□□□ -0.54
Ska1Q9CPV1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Ska1Q9CPV1 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ska1Q9CPV1 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms